Microglia constantly survey the brain, eat debris and invaders, prune unwanted synapses during development β and are now central suspects in Alzheimer's disease and other conditions.
Microglia: The Brain's Immune Cells

In plain English
Microglia are the brain's own immune cells. They constantly scan their surroundings, swallow dead cells and germs, and trim away unneeded connections between neurons. When they misbehave, they may contribute to brain diseases.
Intermediate level: Builds on the basics. Introduces the real vocabulary and the mechanisms behind it.
Concepts to know first
Microglia make up roughly 5β10% of the cells in the brain. Unlike neurons and other glia, which develop from the embryo's nervous tissue, microglia come from the yolk sac early in development and migrate into the brain before the blood-brain barrier closes. They then renew themselves locally throughout life.
Always on patrol
In the healthy brain, microglia were once called "resting". Imaging in living mice in 2005 showed otherwise: their fine branches are in constant motion, sweeping their territory every few hours. When they detect damage β leaked molecules from injured cells, bacteria, abnormal proteins β they rush in, change shape and engulf the debris in a process called phagocytosis.
Sculpting circuits
During development the brain makes far more synapses than it keeps. Microglia help prune them, engulfing synapses tagged by proteins of the complement system, an ancient part of the immune system. Work in mice has shown that synapses that are less active are more likely to be marked and removed β a "use it or lose it" rule carried out by immune cells.
Friends and foes in disease
Many genes that raise the risk of late-onset Alzheimer's disease, such as TREM2, are active mainly in microglia, suggesting these cells play a central role. Microglia can clear amyloid, but chronic activation may also cause harmful inflammation and excessive synapse loss. They are implicated in multiple sclerosis, chronic pain and possibly psychiatric conditions. Variants of the complement gene C4, which affect synaptic pruning, have been associated with schizophrenia risk.
Everyday examples & things to try
Gardeners with clippers
Microglia are like gardeners walking through a hedge maze. They pick up litter and pests, but they also trim branches that aren't being used, keeping the paths that matter clear. Prune too little and the hedge is overgrown; prune too much and you lose the shape.
Key takeaways
- Microglia are the brain's resident immune cells, originating from the yolk sac.
- They constantly survey the brain and prune synapses during development.
- Many Alzheimer's risk genes act in microglia.
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