NeuroScience Decoded
NeuroScience Decoded

A plain-language encyclopedia of the brain — history and pioneers, neurons and synapses, brain chemistry and anatomy, senses, memory, emotion, sleep and consciousness, disorders and treatments, brain-computer interfaces and AI. Every entry with a plain-English summary, everyday examples and links to the concepts you need first.

Glossary A–Z

The 73 words you'll meet most often in neuroscience — from action potential and amygdala to synapse and working memory — each in one line, then a little more, with a link to the entry that explains it properly.

A

  • Acetylcholine
    Acetylcholine/a-SEE-tul-KOH-leen/
    Chemistry · The transmitter that moves muscles and aids attention.

    The first neurotransmitter discovered; it triggers skeletal muscle contraction, runs the parasympathetic system and supports attention and memory in the brain.

  • Action potential
    Signaling · The brief electrical spike a neuron fires.

    An all-or-nothing reversal of the membrane voltage lasting about a millisecond, driven by sodium rushing in and potassium rushing out, that travels along the axon.

  • Amygdala
    Amygdala/uh-MIG-duh-luh/
    Anatomy · Almond-shaped hub for threat and emotional significance.

    A cluster of nuclei deep in each temporal lobe that detects emotionally important events, drives fear responses and strengthens emotional memories.

  • Aphasia
    Aphasia/uh-FAY-zhuh/
    Clinical · Loss of language ability after brain damage.

    A disorder of producing or understanding language, most often after a left-hemisphere stroke; Broca's and Wernicke's aphasias are classic types.

  • Astrocyte
    Astrocyte/AS-troh-site/
    Cells · Star-shaped glial cell that supports neurons.

    A glial cell that clears neurotransmitter and potassium, supplies energy, links neurons to blood vessels and helps form the blood-brain barrier.

  • Axon
    Axon/AK-son/
    Cells · A neuron's output cable.

    The single long fibre that carries action potentials away from the cell body to the axon terminals, often insulated with myelin.

B

  • Basal ganglia
    Anatomy · Deep nuclei that select actions and form habits.

    Interconnected structures including the striatum, globus pallidus, subthalamic nucleus and substantia nigra that gate movement and learn from reward.

  • BDNF
    Chemistry · A growth factor that supports plasticity.

    Brain-derived neurotrophic factor, a neurotrophin that helps neurons survive and synapses change; levels rise with exercise.

  • Blood-brain barrier
    Cells · The seal between blood and brain tissue.

    Tight junctions between the cells lining brain capillaries that keep most large molecules, germs and many drugs out of the brain.

  • Brain-computer interface
    Technology · A device that turns brain signals into commands.

    A system that records and decodes brain activity to control a computer, robotic arm or synthetic voice — used experimentally by people with paralysis.

  • Brainstem
    Anatomy · The stalk that runs life support.

    The medulla, pons and midbrain, which control breathing, heart rate and arousal and carry all signals between brain and body.

  • Broca's area
    Broca's area/BROH-kuhz/
    Anatomy · Left frontal region for speech production.

    Part of the left inferior frontal gyrus important for producing speech and grammar, named after Paul Broca, who described it in 1861.

C

  • Cerebellum
    Cerebellum/ser-uh-BEL-um/
    Anatomy · The 'little brain' that coordinates movement.

    The structure at the back of the brain that times and fine-tunes movement and balance and drives motor learning; it holds about 80% of the brain's neurons.

  • Cerebral cortex
    Anatomy · The brain's folded outer sheet.

    A 2–4 mm thick layer of grey matter, mostly six-layered, divided into lobes and areas for senses, movement, language and thought.

  • Cerebrospinal fluid
    Anatomy · The fluid that cushions the brain.

    Clear fluid made by the choroid plexus that fills the ventricles and surrounds the brain and spinal cord, providing buoyancy and clearing waste.

  • Circadian rhythm
    Circadian rhythm/sur-KAY-dee-un/
    Sleep · The body's roughly 24-hour clock.

    Daily cycles of sleep, alertness, temperature and hormones set by the suprachiasmatic nucleus and reset by light.

  • Connectome
    Methods · A complete map of neural connections.

    A wiring diagram of a nervous system, from region-to-region pathways to every synapse between every neuron.

  • Corpus callosum
    Anatomy · The bridge between the two hemispheres.

    A thick band of about 200 million axons connecting the left and right cerebral hemispheres; cutting it produces the split-brain condition.

  • Critical period
    Development · A window when experience shapes a circuit most.

    A developmental stage when a brain system is especially sensitive to specific input, as for binocular vision and language.

D

  • Deep brain stimulation
    Treatment · An implanted 'pacemaker' for the brain.

    Electrodes placed in deep brain targets deliver electrical pulses to treat Parkinson's disease, tremor, dystonia, epilepsy and OCD.

  • Default mode network
    Networks · Brain network active during mind-wandering.

    Regions including the medial prefrontal and posterior cingulate cortex that are more active at rest and during self-related thought, memory and imagination.

  • Dendrite
    Dendrite/DEN-drite/
    Cells · A neuron's branching input tree.

    Branched extensions of a neuron that receive synaptic inputs from other neurons, often covered in tiny dendritic spines.

  • Dopamine
    Dopamine/DOH-puh-meen/
    Chemistry · Transmitter for movement, motivation and learning.

    A monoamine released by midbrain neurons that signals reward prediction errors and 'wanting'; its loss causes Parkinson's disease.

E

  • EEG
    Methods · Recording brain waves from the scalp.

    Electroencephalography measures the summed electrical activity of cortical neurons with millisecond timing, used in sleep, epilepsy and cognition research.

  • Endorphin
    Endorphin/en-DOR-fin/
    Chemistry · The body's own opioid.

    A neuropeptide that acts on opioid receptors to dampen pain and contribute to reward and stress responses.

  • Engram
    Engram/EN-gram/
    Cognition · The physical trace of a memory.

    The set of neurons and synaptic changes that store a particular memory; in mice, engram cells can be reactivated with light.

  • Executive function
    Cognition · The brain's management skills.

    Inhibition, working memory and cognitive flexibility, supporting planning and self-control; they depend on the prefrontal cortex.

F

  • fMRI
    Methods · Imaging brain activity through blood oxygen.

    Functional MRI tracks the BOLD signal — changes in blood oxygenation that follow neural activity — with millimetre resolution over seconds.

G

  • GABA
    GABA/GAB-uh/
    Chemistry · The brain's main inhibitory transmitter.

    Gamma-aminobutyric acid, the main 'brake' of the brain; alcohol, benzodiazepines and many anaesthetics boost its receptors.

  • Glia
    Glia/GLEE-uh/
    Cells · The non-neuronal cells of the nervous system.

    Astrocytes, oligodendrocytes, Schwann cells, microglia and ependymal cells, which support, insulate, feed and defend neurons.

  • Glutamate
    Glutamate/GLOO-tuh-mate/
    Chemistry · The brain's main excitatory transmitter.

    The amino acid used by most excitatory synapses; it drives learning through NMDA receptors but kills neurons in excess (excitotoxicity).

  • Grey matter
    Anatomy · Brain tissue rich in cell bodies.

    Tissue dominated by neuron cell bodies, dendrites and synapses, forming the cortex and deep nuclei; it looks grey compared with myelinated white matter.

  • Grid cell
    Cognition · Neuron firing in a triangular lattice across space.

    Entorhinal cortex cells that fire at regularly spaced locations, forming a coordinate system for navigation; discovered by the Mosers in 2005.

  • Gyrus and sulcus
    Gyrus and sulcus/JY-rus / SUL-kus/
    Anatomy · The ridges and grooves of the cortex.

    A gyrus is a ridge on the folded cortex and a sulcus a groove; folding lets a large cortical sheet fit inside the skull.

H

  • Hebbian learning
    Cognition · 'Cells that fire together wire together.'

    Donald Hebb's 1949 rule that a connection strengthens when one neuron repeatedly helps fire another — a foundation of theories of learning.

  • Hippocampus
    Hippocampus/hip-oh-KAM-pus/
    Anatomy · Seahorse-shaped structure for memory and maps.

    A medial temporal lobe structure essential for forming new episodic and semantic memories and for spatial navigation.

  • Homunculus
    Homunculus/hoh-MUNG-kyuh-lus/
    Anatomy · The distorted body map in the cortex.

    A figure drawn in proportion to the cortical area devoted to each body part — with huge hands and lips — mapped by Wilder Penfield.

  • Hypothalamus
    Hypothalamus/hy-poh-THAL-uh-mus/
    Anatomy · The body's homeostasis controller.

    A small region regulating temperature, hunger, thirst, sleep, stress and hormones through the pituitary gland.

I

  • Interneuron
    Cells · A neuron connecting other neurons.

    A neuron that links sensory and motor neurons or other neurons within the CNS; many cortical interneurons are inhibitory and use GABA.

  • Interoception
    Interoception/in-ter-oh-SEP-shun/
    Senses · Sensing the body's internal state.

    Perception of heartbeat, breathing, hunger and other internal signals, processed in the insula and important for emotion.

  • Ion channel
    Signaling · A protein pore that lets ions cross membranes.

    Selective pores that open in response to voltage, chemicals, stretch or temperature, underlying every electrical signal in neurons.

L

  • Long-term potentiation
    Cognition · Lasting strengthening of synapses.

    LTP, discovered by Bliss and Lømo in 1973, is an activity-dependent increase in synaptic strength and a leading cellular model of memory.

M

  • Microglia
    Microglia/my-KROG-lee-uh/
    Cells · The brain's resident immune cells.

    Glial cells that patrol the brain, engulf debris and prune synapses; many Alzheimer's risk genes act in them.

  • Motor cortex
    Anatomy · Strip of cortex that commands movement.

    The primary motor cortex on the precentral gyrus sends commands to muscles on the opposite side of the body, arranged as a body map.

  • Myelin
    Myelin/MY-uh-lin/
    Cells · Fatty insulation around axons.

    Layers of membrane wrapped around axons by oligodendrocytes and Schwann cells, enabling fast saltatory conduction.

N

  • Neurogenesis
    Development · The birth of new neurons.

    The production of neurons from progenitor cells — massive before birth and debated in the adult human hippocampus.

  • Neuron
    Neuron/NYOOR-on/
    Cells · The nerve cell — the brain's signalling unit.

    A cell specialised to receive, integrate and transmit electrical and chemical signals via dendrites, cell body and axon.

  • Neuroplasticity
    Development · The brain's ability to change.

    Changes in synapses, structure and maps in response to experience, learning and injury, continuing throughout life.

  • Neurotransmitter
    Chemistry · A chemical messenger released at synapses.

    Molecules such as glutamate, GABA, dopamine and serotonin that neurons release to influence other cells.

  • NMDA receptor
    Signaling · Glutamate receptor that detects coincidence.

    An ion channel opening only with glutamate plus depolarisation, letting in calcium that triggers learning; blocked by ketamine.

  • Nociceptor
    Nociceptor/NOH-see-sep-ter/
    Senses · A sensor for potentially harmful stimuli.

    Free nerve endings that respond to intense pressure, extreme temperature and chemicals from damaged tissue, starting the pain pathway.

  • Node of Ranvier
    Node of Ranvier/RAHN-vee-ay/
    Cells · A gap in the myelin sheath.

    Short unmyelinated stretches of axon packed with sodium channels, where the action potential is regenerated as it jumps along.

  • Noradrenaline
    Chemistry · Transmitter of arousal and alertness.

    Also called norepinephrine; released by the locus coeruleus in the brain and by sympathetic nerves for fight-or-flight.

O

  • Oligodendrocyte
    Oligodendrocyte/OL-ih-goh-DEN-droh-site/
    Cells · Glial cell that myelinates CNS axons.

    A glial cell in the brain and spinal cord that wraps segments of many axons in myelin.

  • Optogenetics
    Methods · Controlling neurons with light.

    Inserting light-sensitive opsins into specific neurons so they can be switched on or off by flashes of light in milliseconds.

P

  • Place cell
    Cognition · Neuron that fires in one location.

    Hippocampal neurons that fire when an animal is in a particular place, discovered by John O'Keefe in 1971.

  • Prefrontal cortex
    Anatomy · Front of the brain for planning and control.

    The front part of the frontal lobe supporting working memory, planning, impulse control, decisions and social behaviour.

  • Proprioception
    Proprioception/proh-pree-oh-SEP-shun/
    Senses · The sense of where your body is.

    Information from muscle spindles, tendon organs and joints that tells the brain the position and movement of the limbs.

R

  • Receptor
    Signaling · A protein that detects a chemical signal.

    Proteins on cells that bind neurotransmitters or drugs — either ion channels (ionotropic) or G-protein-coupled (metabotropic).

  • Reflex
    Movement · A fast automatic response.

    A stereotyped response organised in the spinal cord or brainstem, such as the knee jerk or pulling away from heat.

  • REM sleep
    Sleep · The sleep stage of vivid dreams.

    Rapid eye movement sleep, with wake-like brain waves, vivid dreams and muscle paralysis, discovered in 1953.

  • Resting membrane potential
    Signaling · A neuron's baseline voltage (about −70 mV).

    The voltage across a resting neuron's membrane, set mainly by potassium leaking out and maintained by the sodium-potassium pump.

  • Reward prediction error
    Chemistry · The gap between expected and actual reward.

    A learning signal carried by dopamine neurons: a burst for better-than-expected outcomes, a dip for worse.

S

  • Saltatory conduction
    Saltatory conduction/SAL-tuh-tor-ee/
    Signaling · Signals 'jumping' along myelinated axons.

    The regeneration of the action potential only at nodes of Ranvier, making conduction much faster and more efficient.

  • Serotonin
    Serotonin/ser-uh-TOH-nin/
    Chemistry · Transmitter for mood, sleep and appetite.

    A monoamine (5-HT) from the raphe nuclei with at least 14 receptor types; target of SSRIs and psychedelics.

  • Spinal cord
    Anatomy · The cable between brain and body.

    A column of nervous tissue in the spine carrying signals and organising reflexes and walking rhythms, with 31 pairs of spinal nerves.

  • Synapse
    Synapse/SIN-aps/
    Signaling · The junction where neurons communicate.

    A presynaptic terminal, a narrow cleft and a postsynaptic membrane with receptors; named by Charles Sherrington in 1897.

  • Synaptic pruning
    Development · Removal of unused connections.

    The elimination of weak or inactive synapses during childhood and adolescence, partly carried out by microglia.

T

  • Thalamus
    Thalamus/THAL-uh-mus/
    Anatomy · The brain's sensory relay and gate.

    Paired structures relaying all senses except smell to the cortex and helping regulate attention, sleep and consciousness.

V

  • Vagus nerve
    Vagus nerve/VAY-gus/
    Anatomy · The great wandering nerve.

    Cranial nerve X, linking the brainstem to the heart, lungs and gut and carrying most parasympathetic fibres.

W

  • Wernicke's area
    Wernicke's area/VER-nih-kuhz/
    Anatomy · Left temporal region for understanding speech.

    Part of the left superior temporal gyrus important for language comprehension, described by Carl Wernicke in 1874.

  • White matter
    Anatomy · The brain's myelinated wiring.

    Tissue made mostly of myelinated axons connecting brain regions; its fat-rich myelin gives it a pale colour.

  • Working memory
    Cognition · Holding information in mind briefly.

    A limited system (about four chunks) for keeping and manipulating information for seconds, relying on prefrontal and parietal cortex.